The Tdp1 Assay Kit contains all reagents for routine detection of Tdp1 activity using the tyrosine release assay from the substrate Oligo-Tyr (human tdp1 is sold separately). The assay is highly specific for Tdp1.
These HR/NHEJ kits are cell based, meaning they have the HR or NHEJ GFP reporters pre-installed. A single plasmid (I-Sce1) is transfected to activate repair. Please see this table for a summary and comparison/application of each kit.
Homologous GFP Repair Systems
HeLa Cell HR Kit (I-Sce1 Based)
HeLa Cell HR Kit (CRISPR-CAS Based)
Human Neuroblastoma Cell Line SH-SY5Y using (I-Sce1 transfection)
Mouse 3T3 Cell Line using I-Sce1 transfection
Mouse Neuronal Cell Line using I-Sce1 transfection
Custom construction Kit to make your own HR Cell Reporter
NHEJ GFP Reporter
Systems
Transfection-based HR and NHEJ kits use transient transfections to make a pool of cells containing the DNA reporters to allow the investigator to interrogate the 2 major DNA repair pathways. The advantages are:
Starting from $410.00
The Tdp1 Assay Kit contains all reagents for routine detection of Tdp1 activity using the tyrosine release assay from the substrate Oligo-Tyr (human tdp1 is sold separately). The assay is highly specific for Tdp1.
If you want to order this product, please contact us.
The Tdp1 Assay Kit contains all reagents for routine detection of Tdp1 activity using the tyrosine release assay from the substrate Oligo-Tyr (human tdp1 is sold separately). The assay is highly specific for Tdp1.
Volumes are given for the 100 assay kit size. For the 250 assay kit size, multiply volumes by 2.5 fold. Note that this kit does not include Tyrosyl DNA Phosphodiesterase, which is sold separately (see link below). We recommend reconstructing the assay using the purified Tdp1 to ensure that the assay is optimized and working well.
This kit may be shipped on wet ice (or dry ice internationally). The buffers and oligo can be stored at 4°C (short term storage) or at -20°C (long term). The components in this kit are not sensitive to freezing and thawing.
If you require additional information about this product, please contact us at: support@topogen.com
Assay Protocol Overview:
Reaction volumes should be 10-20 ul final volume (limited by volume that can be loaded onto the gel). Reactions are assembled in microfuge tubes with water, buffer and Oligo-Tyrosine substrate. The test fractions should be added last and the reactions incubated at 37 C for at least 15 min. then terminated with 10 ul of the stop buffer. Analyze on a denaturing polyacrylamide gel or by DNA sequencing gel electrophoresis.
Actual Tdp1 assay is shown in the images above. In this analysis, 5’ end labeled Oligo, linked to a tyrosine moiety on the opposite (3’) end, was incubated with purified human Tdp1 from TopoGEN. The release of tyrosine was measured on a DNA sequencing gel that monitors a change in molecular weight.

