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TG2013
Kinetoplast DNA (kDNA) is the ideal substrate for topoisomerase II assays because it is specific for type II reaction mechanisms.  Researchers can even assay for a type II enzyme in the presence of large excess of topoisomerase I.  Thus, kDNA works well to quantify type II activity in crude cell extracts, which are frequently overloaded with topoisomerase I.  kDNA works exceptionally well with human Top 2a and b as well as prokaryotic enzymes, such as DNA Gyrase or Topoisomerase IV.  This substrate is packaged with our Topo II Assay Kit, Topo II Drug Screening Kit, and Gyrase Assay Kits.          
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TG2020-1
Assays employing crude extracts for topo II activity based upon relaxation of supercoiled DNA can be complicated due to the presence of topo I in partially purified fractions.  Additional complications arise with contaminating nuclease activity (due to Mg++) which degrade or nick the supercoiled substrate.  These problems can be avoided by using a catenated DNA substrate prepared from the kinetoplast of the insect trypanosome Crithidia fasciculata.  KDNA is an aggregate of interlocked DNA minicircles (mostly 2.5 kb) that form extremely large networks of high molecular weight.
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TG2018-1
Assays employing crude extracts for topo II activity based upon relaxation of supercoiled DNA can be complicated due to the presence of topo I in partially purified fractions.  Additional complications arise with contaminating nuclease activity (due to Mg++) which degrade or nick the supercoiled substrate.  These problems can be avoided by using a catenated DNA substrate prepared from the kinetoplast of the insect trypanosome Crithidia fasciculata.
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TG2030
Supercoiled pHOT-1 plasmid is the perfect substrate for assaying any topoisomerase, although it was developed for Topo I because it has a top1 high affinity binding site. Why do we call it pHOT-1?  It’s because we are the only company to offer a supercoiled plasmid DNA substrate engineered to attract and drive the process of top1 relaxation and cleavage.  SC pHOT-1 is relatively small (<3KB) which is ideal for displaying intermediate topoisomers.  Since all topoisomerases display degenerate DNA binding and cleavage sequences, pHOT-1 will effectively support activity for a wide array of topoisomerase.  
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TG2035
Relaxed pHOT-1 DNA is suited to assaying the supercoiling activity of DNA gyrase.  It is also useful for assaying alterations in DNA linking number for assessing intercalation.    
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